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  2. BLAST (biotechnology) - Wikipedia

    en.wikipedia.org/wiki/BLAST_(biotechnology)

    BLAST (biotechnology) In bioinformatics, BLAST (basic local alignment search tool) [3] is an algorithm and program for comparing primary biological sequence information, such as the amino-acid sequences of proteins or the nucleotides of DNA and/or RNA sequences.

  3. National Center for Biotechnology Information - Wikipedia

    en.wikipedia.org/wiki/National_Center_for...

    Website. ncbi.nlm.nih.gov. The National Center for Biotechnology Information (NCBI) [1][2] is part of the United States National Library of Medicine (NLM), a branch of the National Institutes of Health (NIH). It is approved and funded by the government of the United States. The NCBI is located in Bethesda, Maryland, and was founded in 1988 ...

  4. List of sequence alignment software - Wikipedia

    en.wikipedia.org/wiki/List_of_sequence_alignment...

    HPC-BLAST: NCBI compliant multinode and multicore BLAST wrapper. Distributed with the latest version of BLAST, this wrapper facilitates parallelization of the algorithm on modern hybrid architectures with many nodes and many cores within each node. [2] Protein: Burdyshaw CE, Sawyer S, Horton MD, Brook RG, Rekapalli B: 2017 CS-BLAST

  5. GenBank - Wikipedia

    en.wikipedia.org/wiki/GenBank

    The GenBank sequence database is an open access, annotated collection of all publicly available nucleotide sequences and their protein translations. It is produced and maintained by the National Center for Biotechnology Information (NCBI; a part of the National Institutes of Health in the United States) as part of the International Nucleotide Sequence Database Collaboration (INSDC).

  6. FASTA format - Wikipedia

    en.wikipedia.org/wiki/FASTA_format

    www.ncbi.nlm.nih.gov /BLAST /fasta.shtml In bioinformatics and biochemistry , the FASTA format is a text-based format for representing either nucleotide sequences or amino acid (protein) sequences, in which nucleotides or amino acids are represented using single-letter codes.

  7. David J. Lipman - Wikipedia

    en.wikipedia.org/wiki/David_J._Lipman

    David J. Lipman. David J. Lipman is an American biologist who from 1989 [3] to 2017 was the director of the National Center for Biotechnology Information (NCBI) at the National Institutes of Health. [4][5] NCBI is the home of GenBank, [6] the U.S. node of the International Sequence Database Consortium, and PubMed, one of the most heavily used ...

  8. BLOSUM - Wikipedia

    en.wikipedia.org/wiki/BLOSUM

    Positive and zero values have been highlighted. In bioinformatics, the BLOSUM (BLO cks SU bstitution M atrix) matrix is a substitution matrix used for sequence alignment of proteins. BLOSUM matrices are used to score alignments between evolutionarily divergent protein sequences. They are based on local alignments.

  9. Warren Gish - Wikipedia

    en.wikipedia.org/wiki/Warren_Gish

    Warren Gish. I. SV40 mutants isolated from transformed human cells. II. Methods for sequence analysis (1988) Warren Richard Gish is the owner of Advanced Biocomputing LLC. He joined Washington University in St. Louis as a junior faculty member in 1994, and was a Research Associate Professor of Genetics from 2002 to 2007. [2] [3]